Sep 05, 2024PRESS RELEASE

Researchers discover mechanism of de novo membrane formation through membrane traffic rearrangement during gametogenesis

Keyword:RESEARCH

OBJECTIVE.

Researchers from Rikkyo University, the University of Tsukuba, and RIKEN have uncovered the mechanism of gametogenesis of budding yeast, a process involving meiosis and spore formation, by using live-cell imaging for detailed observation. In their study, the researchers discovered that both endoplasmic reticulum (ER) exit sites — which serve as the starting point for membrane traffic to transport essential proteins and lipids — and the Golgi apparatus are regenerated in nascent spores. This regeneration mechanism leads to the efficient formation of cell membranes of spores.

Sexual reproduction is a common mode of reproduction in many species. Gametes, which differentiate from germ cells, produce offspring after fertilization or conjugation. In animals and plants, eggs and sperms differentiate from germ cells, while in budding yeast, spores are formed within cells. In the latter process, a de novo membrane structure called prospore membrane is formed within the diploid cell, enveloping the nucleus produced during meiosis and resulting in the generation of four haploid spores. However, the mechanism underlying the formation of this new membrane structure has not yet been fully elucidated.

In the present study, live-cell imaging was employed to observe the process of meiosis and spore formation in detail, successfully capturing the moment when a membrane structure is formed inside a cell. The researchers focused on the secretory pathway which consists of the ER and the Golgi apparatus, transports proteins and lipids. They revealed that the number of ER exit sites, which serve as the starting point for membrane traffic, and the Golgi apparatus decrease during meiosis, but they reassemble during spore formation. The researchers’ search for molecules that control this process also led to the discovery of protein phosphatase-1 (PP-1) and its development-specific subunit, Gip1. They found that in cells lacking Gip1, ER exit sites were not regenerated, resulting in prospore membranes of abnormal size. In other words, during spore formation cells have a mechanism for remodeling the secretory pathway, which enables the efficient transport of lipids for prospore membrane formation.

Some diseases related to human gamete formation and fertilization are caused by failures in membrane traffic. The results of the present study are expected to elucidate the mechanisms by which these diseases develop, potentially leading to new diagnostic and treatment approaches.

Research representatives

  • Assistant Professor Yasuyuki Suda
    Faculty of Medicine, University of Tsukuba
  • Professor Hiroyuki Tachikawa
    College of Sport and Wellness, Rikkyo University
  • Deputy Director Akihiko Nakano
    Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics

Research background

The cell is the basic unit of life in all organisms and is enclosed within a biological membrane (cell membrane) consisting of lipids and proteins. Inside cells, there are various organelles that are enclosed by biological membranes, each of which has its specific role and supports the cell's activities.

Many proteins produced in a cell are transported through intracellular membrane traffic*1. ER and the Golgi apparatus are important organelles in this pathway. A wide variety of proteins and lipids produced in the ER, which are components of the cell membrane, are transported through specific regions of the ER membrane (ER exit sites) to the Golgi apparatus. The Golgi apparatus then sorts these proteins and lipids for delivery to their final destinations.

The life cycle of budding yeast, a eukaryote like humans (see Figure 1), includes the production of gametes through sexual reproduction. During meiosis and spore formation — gamete production in budding yeast — four new haploid cells, known as endospores, are produced inside a diploid cell (see Figure 2). In this process, new membrane structures are formed inside the diploid cell, enveloping the nucleus to create new cells, which are the spores. These spores will subsequently mature. However, it was unclear how membrane traffic, involving the ER and the Golgi apparatus, is controlled when supplying lipids to the new cell membranes at this stage.

Figure 1 The life cycle of budding yeast. In budding yeast, haploid cells contain a single pair of chromosomes (indicated in blue and red), while diploid cells contain two pairs of chromosomes (indicated in green). Both haploid and diploid cells can exist stably, and proliferate through budding. When a haploid cell encounters another haploid cell of the opposite mating type, they conjugate to form a diploid cell. When a diploid cell experiences nutrient starvation, it undergoes meiosis to create spores. Under sufficient nutrient conditions, these spores can germinate and develop into haploid cells, restarting the proliferation cycle.

Figure 2 Formation of prospore membrane during meiosis and spore formation. The prospore membrane is formed within a cell during the middle stage of the second meiotic division, enveloping the nucleus and resulting in the production of mature endospores.

Research details and results

The research team employed a method called live-cell imaging to conduct detailed observations of the movements of the cell membrane (prospore membrane), the ER, and the Golgi apparatus during spore formation. They achieved this by labeling each target with a different fluorescent protein. The results showed that the number of ER exit sites per cell decreased as meiosis progressed, but increased following the second meiotic division. The team then utilized super-resolution confocal live imaging microscopy (SCLIM)*3 to examine the precise location of the ER exit sites within the cell and to observe their proliferation. During this process, the team simultaneously and three-dimensionally captured the movement of both the prospore membrane and the ER exit sites over time (see Figure 3). The results showed that the ER exit sites whose number in a cell decreased during meiosis are regenerated inside the newly formed prospore membranes.

Figure 3 Prospore membrane formation and regeneration of ER exit sites. Using the SCLIM, the movements of prospore membranes (indicated in magenta) and ER exit sites (indicated in green) were observed. The numerals indicate elapsed time (minutes).

Previous research has shown that the membrane lipids necessary for prospore membrane formation are derived from the Golgi apparatus, and that the Golgi apparatus and ER exit sites are closely related in all species. In the present study, the research team focused on a mutant previously reported to affect the morphogenesis of the prospore membrane in order to identify components linked to the regeneration of ER exit sites during spore formation. The team's examination revealed that a mutant lacking Gip1, known as a targeting subunit of protein phosphatase-1, exhibited no regeneration of ER exit sites. Previous research indicated that in a mutant lacking Gip1, prospore membrane formation proceeds normally during the initial stages; however, further growth of the prospore membrane stops, preventing the production of mature spores. The team's analysis demonstrated that while in a wild-type strain the Golgi apparatus reassembled after the regeneration of ER exit sites, no reassembly of the Golgi apparatus occurred in the mutant lacking Gip1. The team conducted further analysis and found that Sec16, a protein essential for the formation of ER exit sites after the second meiotic division, was not localized properly.

Figure 4 Model of prospore membrane growth. Protein phosphatase-1 and Gip1 work together to position Sec16 on the ER within the nascent spore, facilitating the regeneration of ER exit sites. The Golgi apparatus is subsequently formed to supply membrane lipids through the membrane traffic pathway to prospore membrane, enabling its proper growth.

The results indicated that the organelles involved in membrane traffic were significantly remodeled to specialize in the formation of new biological membranes (Figure 4). Moreover, this study suggests the presence of a signal transduction mechanism that regulates changes in this membrane traffic system.

Future prospects

The present study provides insights into the mechanisms of cell membrane formation during meiosis and spore formation, which are gamete formation in budding yeast. The molecular groups associated with the formation of ER exit sites, including Sec16, are conserved across species. In humans, defects in the intracellular transport system causes various diseases. In addition, any failure in gamete formation can lead to abnormalities in gamete development and infertility. The results of this study are expected to enhance our understanding of the mechanisms underlying diseases related to gamete formation and fertilization, as well as facilitating their diagnosis and treatment.

Glossary

  • *1: Membrane traffic
    The system responsible for transporting proteins and other substances through vesicles and tubules between organelles in eukaryotic cells.
  • *2: Live-cell imaging
    A method that utilizes a microscopic system capable of capturing time-lapse images (frame-by-frame video) to observe changes in the movement and shape of cells and living organisms while they are alive.
  • *3: Super-resolution Confocal Live Imaging Microscopy (SCLIM)
    Developed by the Live Cell Super-Resolution Imaging Research Team at the RIKEN Center for Advanced Photonics, this microscopy system is ideal for observing and recording rapidly moving targets within cells.

Research funding

The present study was conducted as part of a research project funded by Grants-in-Aid for Scientific Research (21K06145, 23K05006, 18H05275, 22K06074) from the Japan Society for the Promotion of Science.

Published article

  • Title: Remodeling of the secretory pathway is coordinated with de novo membrane formation in budding yeast gametogenesis
  • Authors: Yasuyuki Suda (Assistant Professor, Department of Molecular Cell Biology, Faculty of Medicine, University of Tsukuba), Hiroyuki Tachikawa (Professor, College of Sport and Wellness, Rikkyo University), Tomomi Suda (Technician, Department of Molecular Cell Biology, Faculty of Medicine, University of Tsukuba), Kazuo Kurokawa (Senior Research Scientist, Live Cell Super-Resolution Imaging Research Team, RIKEN Center for Advanced Photonics), Akihiko Nakano (Deputy Director of RIKEN Center for Advanced Photonics), and Kenji Irie (Professor, Department of Molecular Cell Biology, Faculty of Medicine, University of Tsukuba)
  • Journal: iScience
  • Date of publication: August 29, 2024
  • DOI: 10.1016/j.isci.2024.110855

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